chr11:67350932:G>T Detail (hg19) (GSTP1)

Information

Genome

Assembly Position
hg19 chr11:67,350,932-67,350,932
hg38 chr11:67,583,461-67,583,461 View the variant detail on this assembly version.

HGVS

[No Data.]
Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics Show details

Frequency

JP HGVD:[No Data.]
ToMMo:0.141
NCBN:[No Data.]
NCBN(Hondo):[No Data.]
NCBN(Ryukyu):[No Data.]
East asia ExAC:[No Data.]

Prediction

ClinVar

Clinical Significance Benign
Review star
Show details
Links
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
Clinical significance Last evaluated Review status Condition Origin Links
Benign 2021-06-19 criteria provided, single submitter not provided germline Detail
CIViC
[No Data.]
DisGeNET
Score Disease name Description Source Pubmed Links
0.224 asthma Chromosome 11 haplotype CTACGAGGCC (corresponding to MS4A2 rs574700, rs1441586, ... BeFree 21320344 Detail
0.055 asthma Chromosome 11 haplotype CTACGAGGCC (corresponding to MS4A2 rs574700, rs1441586, ... BeFree 21320344 Detail
Annotation

Annotations

DescrptionSourceLinks
NC_000011.10:g.67583461G>T AND not provided ClinVar Detail
Chromosome 11 haplotype CTACGAGGCC (corresponding to MS4A2 rs574700, rs1441586, rs556917, rs502581, ... DisGeNET Detail
Chromosome 11 haplotype CTACGAGGCC (corresponding to MS4A2 rs574700, rs1441586, rs556917, rs502581, ... DisGeNET Detail
Gene
-
dbSNP
rs17593068 dbSNP
Genome
hg19
Position
chr11:67,350,932-67,350,932
Variant Type
snv
Reference Allele
G
Alternative Allele
T
ToMMo VCF FILTER column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
PASS
Total VCF ID column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
rs17593068
Allele frequency, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
0.1409
Allele count in genotypes, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
2362
Total number of alleles in called genotypes (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
16758
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